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  1. en.vectorbuilder.com › tool › sequence-alignmentSequence Alignment Tool | VectorBuilder

    Hace 3 días · VectorBuilder’s Sequence Alignment tool allows you to not only directly compare two sequences at the DNA or protein level, but also compare two DNA sequences based on translation. You can also design vectors containing your sequence of interest.

  2. www.ebi.ac.uk › jdispatcher › blogUpcoming webinar about Sequence Alignment Tools

    25 de abr. de 2024 · This webinar will introduce the new Job Dispatcher website, showcasing how to navigate through various categories of tools and access them for sequence analysis. We will also demonstrate the latest features and user documentation of the Job Dispatcher.

  3. en.wikipedia.org › wiki › List_of_RNA-Seq_bioinformatics_toolsList of RNA-Seq bioinformatics tools - Wikipedia

    8 de may. de 2024 · A combination of tools is employed: PALMapper (reads alignment), mTiM and mGene (inference of new transcripts). Salmon is a software tool for computing transcript abundance from RNA-seq data using either an alignment-free (based directly on the raw reads) or an alignment-based (based on pre-computed alignments) approach.

  4. www.youtube.com › watchMultiple Sequence Alignment (MSA) with Clustal Omega on Ubuntu...

    29 de abr. de 2024 · This video demonstrates how easy is to use install Clustal Omega on Ubuntu (shell scripting), acquiring BAliBASE reference alignments, conducting multiple sequence alignment (MSA) locally, and ...

  5. libraryguides.umassmed.edu › research › NCBI_databasesSequence Analysis - Researcher Tools, Services and Support -...

    1 de may. de 2024 · COBALT is a protein multiple sequence alignment tool that finds a collection of pairwise constraints derived from conserved domain database, protein motif database, and sequence similarity, using RPS-BLAST, BLASTP, and PHI-BLAST.

  6. en.vectorbuilder.com › tool › sequence-dot-plotNucleic Acid Dot Plot Tool | VectorBuilder

    Hace 3 días · Dot plots show sequence alignments on a two-dimensional plot, where one sequence is placed on the X axis, and the other on the Y axis. Analysis occurs by aligning a portion of the sequence based on window size (default is analysis every 10 bases), and if the mismatches are at or below the limit (default limit is 0), the tool will ...

  7. bmcbiol.biomedcentral.com › articles › 10Fast and accurate variant identification tool for...

    22 de abr. de 2024 · We present QuickVariants, a bioinformatics tool that effectively summarizes variant information from read alignments and identifies variants. When tested on diverse bacterial sequencing data, QuickVariants demonstrates a ninefold higher median speed than bcftools, a widely used variant identifier, with higher accuracy in identifying ...