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Hace 3 días · VectorBuilder’s Sequence Alignment tool allows you to not only directly compare two sequences at the DNA or protein level, but also compare two DNA sequences based on translation. You can also design vectors containing your sequence of interest.
- DNA Reverse Complement
You can fill it in several ways: After designing a vector,...
- GC Content Calculator
GC content of DNA templates is a critical factor which...
- Codon Optimization
Figure 1 below illustrates that when the sequence of native...
- DNA Translation
Input your DNA sequence below to retrieve the translated...
- DNA Secondary Structure
DNA’s primary structure is the list of the ATGC sequence....
- shRNA Target Design
VectorBuilder’s shRNA Target Design tool allows you to...
- DNA Reverse Complement
25 de abr. de 2024 · This webinar will introduce the new Job Dispatcher website, showcasing how to navigate through various categories of tools and access them for sequence analysis. We will also demonstrate the latest features and user documentation of the Job Dispatcher.
8 de may. de 2024 · A combination of tools is employed: PALMapper (reads alignment), mTiM and mGene (inference of new transcripts). Salmon is a software tool for computing transcript abundance from RNA-seq data using either an alignment-free (based directly on the raw reads) or an alignment-based (based on pre-computed alignments) approach.
29 de abr. de 2024 · This video demonstrates how easy is to use install Clustal Omega on Ubuntu (shell scripting), acquiring BAliBASE reference alignments, conducting multiple sequence alignment (MSA) locally, and ...
1 de may. de 2024 · COBALT is a protein multiple sequence alignment tool that finds a collection of pairwise constraints derived from conserved domain database, protein motif database, and sequence similarity, using RPS-BLAST, BLASTP, and PHI-BLAST.
Hace 3 días · Dot plots show sequence alignments on a two-dimensional plot, where one sequence is placed on the X axis, and the other on the Y axis. Analysis occurs by aligning a portion of the sequence based on window size (default is analysis every 10 bases), and if the mismatches are at or below the limit (default limit is 0), the tool will ...
22 de abr. de 2024 · We present QuickVariants, a bioinformatics tool that effectively summarizes variant information from read alignments and identifies variants. When tested on diverse bacterial sequencing data, QuickVariants demonstrates a ninefold higher median speed than bcftools, a widely used variant identifier, with higher accuracy in identifying ...